Harmonising and Unifying Blood Metabolomic Analysis Networks

MSCA (Marie Skłodowska-Curie)HORIZON-TMA-MSCA-DNID: 101073062
EC Contribution
€25,825
Consortium Size
22 orgs
Start Year
2023
Summary

Metabolomics provides a real-time view of the metabolic state of the examined samples. The past decade the field showed strong growth, however limitations intrinsic to the field hinder further application in epidemiology level. Key obstacles include: variety of analyte molecular structures, slow marker identification, large differences in concentrations, poor validation, incomplete combination of data from different analyses and fragmentation of research. The consortium brings together scientists from different complementary disciplines and sectors to collaborate and set a research training network, combining infrastructure experience, knowledge and skills. The research scope is to identify the source of problems that hinder development, and recommend measures to overcome these. Training throughresearch will promote a new generation of omics researchers. Networking, joining forces via secondments will enhance research productivity transfer of knowledge. The project will train 10 ESRs in work-packages aiming toward improvement of design of experiment, harmonization of analytical methods, improved Data Mining and biochemical pathway analysis and translational research. Application will be in the study of blood metabolome of exhaustive physical exercise. We aim to study sample stability & preparation (including blood and alternative forms such as dried blood spots), biomarker identification, exploitation of multiple datasets, promote standard procedures, develop robust pipelines, develop and implement machine searchable notations of metadata, central database for data storage, compare datasets, automate cross-laboratory data combination, develop novel algorithms for multidimensional data mining and reconstruct biochemical pathways. The overall goal is to train the ESRs in cutting edge metabolomics research and at the same time provide proof of concept of democratizing metabolomics by the use of patient centric sampling.

Consortium (22)

Project Results (23)

Source: CORDIS, the EU research results database.

Publications (12)
Deep insights into microsampling technologies for global lipidomic profiling of human whole blood using high-throughput LC-MS
Microchemical Journal· 2025DOI
Sara Londoño-Osorio, Sara Martínez, Glykeria Avgerinou, Anatoli Petridou, Vassilis Mougios, Alma Villaseñor, Antonia García, Ana Gradillas, Coral Barbas
Integrating blood microsampling devices with CE-MS for untargeted analysis of polar metabolomics
Microchemical Journal· 2025DOI
Sara Londoño-Osorio, Daniel Marques de Sá Silva, Sara Martínez, Georgios Theodoridis, Ana Gradillas, Antonia García, Coral Barbas, Víctor González-Ruiz
Metabonaut: let's explore and learn to analyze untargeted metabolomics data
· 2025DOI
Philippine Louail, Marilyn De Graeve, Anna Tagliaferri, Vinicius Verri Hernandes, Daniel Marques de Sá e Silva, Johannes Rainer
MetAssimulo 2.0: a web app for simulating realistic 1D and 2D metabolomic 1H NMR spectra
Bioinformatics· 2025DOI
Yan Yan, Beatriz Jiménez, Michael T Judge, Toby Athersuch, Maria De Iorio, Timothy M D Ebbels
Nontargeted Metabolomics Using the Sciex ZenoTOF 7600
Methods in Molecular Biology, Metabolomics· 2025DOI
Anna Artati, Pauline Couacault, Michael Witting
SpectriPy: Enhancing Cross-Language Mass Spectrometry Data Analysis with R and Python
Journal of Open Source Software· 2025DOI
Marilyn De Graeve, Wout Bittremieux, Thomas Naake, Carolin Huber, Matthias Anagho-Mattanovich, Nils Hoffmann, Pierre Marchal, Victor Chrone, Philippine Louail, Helge Hecht, Michael Witting, Johannes Rainer
Toward minimally invasive metabolomics: GC-MS metabolic fingerprints of dried blood microsamples in comparison to plasma
The Analyst· 2025DOI
Daniel Marques de Sá e Silva, Marlene Thaitumu, Christina Virgiliou, Alexandra Tiganouria, Fernanda Rey-Stolle, Glykeria Avgerinou, Anatoli Petridou, Vasileios Mougios, Georgios Theodoridis, Helen Gika
xcms at 20 and still in peak form: Anchoring a complete metabolomics data preprocessing and analysis software ecosystem
· 2025DOI
Philippine Louail, Carl Brunius, Mar Garcia-Aloy, William Kumler, Norman Storz, Jan Stanstrup, Hendrik Treutler, Pablo Vangeenderhuysen, Michael Witting, Steffen Neumann, Johannes Rainer
Streamlining LC-MS/MS Data Analysis in R with Open-Source xcms and RforMassSpectrometry: An End-to-End Workflow
· 2024DOI
Louail, Philippine; Tagliaferri, Anna; Verri Hernandes, Vinicius; Silva, Daniel M. S.; Rainer, Johannes
Targeted and untargeted metabolomics and lipidomics in dried blood microsampling: Recent applications and perspectives
Analytical Science Advances· 2024DOI
Pauline Couacault, Dennisse Avella, Sara Londoño‐Osorio, Ana S. Lorenzo, Ana Gradillas, Olli Kärkkäinen, Elizabeth Want, Michael Witting
Volumetric Absorptive Microsampling in the Analysis of Endogenous Metabolites
Metabolites· 2023DOI
Daniel Marques de Sá e Silva, Marlene Thaitumu, Georgios Theodoridis, Michael Witting, Helen Gika
Mapping the blood microsample metabolome
da Silva Marques, Daniel
Deliverables (10)
Other Results (1)
Periodic Reporting for period 1 - HUMAN (Harmonising and Unifying Blood Metabolomic Analysis Networks)