EBRAINS 2.0: A Research Infrastructure to Advance Neuroscience and Brain Health

Research InfrastructuresHORIZON-RIAID: 101147319
EC Contribution
€379,952
Consortium Size
60 orgs
Start Year
2024
Summary

EBRAINS is a collaborative European Research Infrastructure designed to advance and accelerate progress in neuroscience and brain health. This innovative infrastructure, a legacy of the Human Brain Project (HBP), is an ecosystem where researchers, clinicians and experts from various disciplines converge to explore and analyze brain complexity – from molecular and cellular levels to the functioning of the entire organ. Therefore, the project aims to create a new standard for brain atlases from the micro- to the macro-scale, link foundational multi-level data and connectomes in the healthy and pathological brain with atlases and models, create digital twins through modelling and simulation as well as unique, excellent, and preferred services for FAIR neuroscience data. The overarching goal of EBRAINS 2.0 is to foster a deeper understanding of brain structure and function with dedicated and mature software tools, to facilitate the development of more effective treatments, new drugs, diagnostics and preventive measures for neuro-psychiatric disorders. We expect that EBRAINS 2.0 catalyzes progress in the field of large-scale models running on HPC towards Exascale and leads to innovative solutions for neuro-inspired computing, and cognitive technologies such as neurorobotics and AI. Sophisticated digital modeling and data analytics capabilities will benefit communities beyond neuroscience, such as biomedicine. We will advance EBRAINS technology, platform services and the base infrastructure roadmap, educate and train a new community of users and developers from academia, industry and SMEs, and ensure knowledge transfer. EBRAINS 2.0 will become the neuroscience hub in the European infrastructure landscape, through building strong links with the European data spaces, EOSC and EuroHPC JU, centers of excellences and other initiatives. Globally, EBRAINS 2.0 will make a strong contribution to the new era of digital neuroscience and foster European leadership in this field.

Consortium (60)

🇧🇪 EBRAINSBE
coordinator
🇫🇷 ASSISTANCE PUBLIQUE HOPITAUX DE PARISFR
partner
🇬🇷 ATHINA-EREVNITIKO KENTRO KAINOTOMIAS STIS TECHNOLOGIES TIS PLIROFORIAS, TON EPIKOINONION KAI TIS GNOSISGR
partner
🇮🇹 AZIENDA SANITARIA UNIVERSITARIA FRIULI CENTRALEIT
partner
🇨🇭 CENTRE HOSPITALIER UNIVERSITAIRE VAUDOISCH
partner
CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS
partner
🇩🇪 CHARITE - UNIVERSITAETSMEDIZIN BERLINDE
partner
🇮🇹 CINECA CONSORZIO INTERUNIVERSITARIOIT
partner
🇷🇴 CODEMART SRLRO
partner
🇫🇷 COMMISSARIAT A L ENERGIE ATOMIQUE ET AUX ENERGIES ALTERNATIVESFR
partner
CONSIGLIO NAZIONALE DELLE RICERCHE
partner
🇦🇹 CONVELOP - COOPERATIVE KNOWLEDGE DESIGN GMBHAT
partner
🇨🇭 ECOLE POLYTECHNIQUE FEDERALE DE LAUSANNECH
partner
🇨🇭 EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICHCH
partner
🇦🇹 EUROPEAN ACADEMY OF NEUROLOGYAT
partner
🇮🇹 FONDAZIONE PER LA RICERCA BIOMEDICA AVANZATA ETSIT
partner
🇩🇰 FONDEN DEMOCRACY XDK
partner
🇩🇪 FORSCHUNGSZENTRUM JULICH GMBHDE
partner
🇩🇪 HEINRICH-HEINE-UNIVERSITAET DUESSELDORFDE
partner
🇩🇪 HITS GGMBHDE
partner
🇫🇷 INSTITUT NATIONAL DE LA SANTE ET DE LA RECHERCHE MEDICALEFR
partner
🇫🇷 INSTITUT NATIONAL DE RECHERCHE EN INFORMATIQUE ET AUTOMATIQUEFR
partner
🇸🇪 KAROLINSKA INSTITUTETSE
partner
🇧🇪 KATHOLIEKE UNIVERSITEIT LEUVENBE
partner
🇩🇪 KLINIKUM DER TECHNISCHEN UNIVERSITÄT MÜNCHEN (TUM KLINIKUM)DE
partner
🇳🇱 KONINKLIJKE NEDERLANDSE AKADEMIE VAN WETENSCHAPPEN - KNAWNL
partner
🇸🇪 KUNGLIGA TEKNISKA HOEGSKOLANSE
partner
🇮🇹 LABORATORIO EUROPEO DI SPETTROSCOPIE NON LINEARIIT
partner
🇱🇹 LIETUVOS SVEIKATOS MOKSLU UNIVERSITETASLT
partner
🇦🇹 MEDIZINISCHE UNIVERSITAET WIENAT
partner
🇦🇹 MEDIZINISCHE UNIVERSITAT INNSBRUCKAT
partner
🇳🇴 NORGES MILJO-OG BIOVITENSKAPELIGE UNIVERSITETNO
partner
POLITECNICO DI MILANO
partner
🇫🇷 PROTISVALOR MEDITERRANEE SASFR
partner
🇩🇰 REGION HOVEDSTADENDK
partner
🇸🇪 RISE RESEARCH INSTITUTES OF SWEDEN ABSE
partner
🇩🇪 RUPRECHT-KARLS-UNIVERSITAET HEIDELBERGDE
partner
🇫🇮 TAMPEREEN KORKEAKOULUSAATIO SRFI
partner
🇩🇪 TECHNISCHE UNIVERSITAET DRESDENDE
partner
🇩🇪 TECHNISCHE UNIVERSITAET MUENCHENDE
partner
🇬🇧 THE CHANCELLOR MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGEGB
partner
🇬🇧 THE UNIVERSITY OF MANCHESTERGB
partner
🇪🇸 UNIVERSIDAD POLITECNICA DE MADRIDES
partner
🇪🇸 UNIVERSIDAD REY JUAN CARLOSES
partner
🇮🇹 UNIVERSITA DEGLI STUDI DI MILANOIT
partner
🇮🇹 UNIVERSITA DEGLI STUDI DI PADOVAIT
partner
🇮🇹 UNIVERSITA DEGLI STUDI DI PAVIAIT
partner
🇮🇹 UNIVERSITA DEGLI STUDI DI TORINOIT
partner
🇨🇭 UNIVERSITAET BERNCH
partner
🇩🇪 UNIVERSITAETSKLINIKUM FREIBURGDE
partner
🇩🇪 UNIVERSITAETSKLINIKUM HAMBURG-EPPENDORFDE
partner
🇩🇪 UNIVERSITAT TRIERDE
partner
🇫🇷 UNIVERSITE D'AIX MARSEILLEFR
partner
🇫🇷 UNIVERSITE DE BORDEAUXFR
partner
🇫🇷 UNIVERSITE GRENOBLE ALPESFR
partner
🇫🇷 UNIVERSITE LYON 1 CLAUDE BERNARDFR
partner
🇧🇪 UNIVERSITEIT GENTBE
partner
🇳🇱 UNIVERSITEIT MAASTRICHTNL
partner
🇳🇴 UNIVERSITETET I OSLONO
partner
🇬🇧 UNIVERSITY COLLEGE LONDONGB
partner

Project Results (99)

Source: CORDIS, the EU research results database.

Publications (84)
A map of mitochondrial biology reveals the energy landscape of the human brain
Nature· 2025DOI
An extended and improved CCFv3 annotation and Nissl atlas of the entire mouse brain
Imaging Neuroscience· 2025DOI
Sébastien Piluso; Csaba Verasztó; Harry Carey; Émilie Delattre; Thibaud L’Yvonnet; Éloïse Colnot; Armando Romani; Jan G. Bjaalie; Henry Markram; Daniel Keller
Assessing the Similarity of Real Matrices with Arbitrary Shape
PRX Life· 2025DOI
Jasper Albers, Anno C. Kurth, Robin Gutzen, Aitor Morales-Gregorio, Michael Denker, Sonja Grün, Sacha J. van Albada, Markus Diesmann
Association between night shift work and markers of metabolism, cardiovascular and immune system in a population-based German cohort
GeroScience· 2025DOI
Nora Bittner, Horst-Werner Korf, Susanne Moebus, Börge Schmidt, Svenja Caspers
Bilingualism and “brain reserve” in subregions of the hippocampal formation
GeroScience· 2025DOI
Katharina Peitz, Nora Bittner, Stefan Heim, Svenja Caspers
Cerebellar control over inter-regional excitatory/inhibitory dynamics discriminates execution from observation of an action
The Cerebellum· 2025DOI
Roberta Maria Lorenzi; Gökçe Korkmaz; Adnan A.S. Alahmadi; Anita Monteverdi; Letizia Casiraghi; Egidio D’Angelo; Fulvia Palesi; Claudia A.M. Gandini Wheeler-Kingshott
Considerations and recommendations from the <scp>ISMRM</scp> diffusion study group for preclinical diffusion <scp>MRI</scp>: Part 1: In vivo small‐animal imaging
Magnetic Resonance in Medicine· 2025DOI
Ileana O. Jelescu, Francesco Grussu, Andrada Ianus, Brian Hansen, Rachel L. C. Barrett, Manisha Aggarwal, Stijn Michielse, Fatima Nasrallah, Warda Syeda, Nian Wang, Jelle Veraart, Alard Roebroeck, Andrew F. Bagdasarian, Cornelius Eichner, Farshid Sepehrband, Jan Zimmermann, Lucas Soustelle, Christien Bowman, Benjamin C. Tendler, Andreea Hertanu, Ben Jeurissen, Marleen Verhoye, Lucio Frydman, Yohan van de Looij, David Hike, Jeff F. Dunn, Karla Miller, Bennett A. Landman, Noam Shemesh, Adam Anderson, Emilie McKinnon, Shawna Farquharson, Flavio Dell'Acqua, Carlo Pierpaoli, Ivana Drobnjak, Alexander Leemans, Kevin D. Harkins, Maxime Descoteaux, Duan Xu, Hao Huang, Mathieu D. Santin, Samuel C. Grant, Andre Obenaus, Gene S. Kim, Dan Wu, Denis Le Bihan, Stephen J. Blackband, Luisa Ciobanu, Els Fieremans, Ruiliang Bai, Trygve B. Leergaard, Jiangyang Zhang, Tim B. Dyrby, G. Allan Johnson, Julien Cohen‐Adad, Matthew D. Budde, Kurt G. Schilling
Demonstrating the Advantages of Analog Wafer-Scale Neuromorphic Hardware
2025 Neuro Inspired Computational Elements (NICE)· 2025DOI
Hartmut Schmidt, Andreas Grübl, José Montes, Eric Müller, Sebastian Schmitt, Johannes Schemmel
Dynamic causal modelling in probabilistic programming languages
Journal of The Royal Society Interface· 2025DOI
Nina Baldy, Marmaduke Woodman, Viktor K. Jirsa, Meysam Hashemi
Evidence for an Evolutionary Continuity in Social Dominance: Insights from Nonhuman Primate Tractography
The Journal of Neuroscience· 2025DOI
Julie Royo, Thomas Orset, Marco Catani, Pierre Pouget, Michel Thiebaut de Schotten
Human brain anatomy and atlases
Encyclopedia of the Human Brain· 2025DOI
Katrin Amunts, Daniel Zachlod
Improving data sharing and knowledge transfer via the Neuroelectrophysiology Analysis Ontology (NEAO)
Scientific Data· 2025DOI
Cristiano A. Köhler; Sonja Grün; Michael Denker
Integrating programmable plasticity in experiment descriptions for analog neuromorphic hardware
2025 Neuro Inspired Computational Elements (NICE)· 2025DOI
Philipp Spilger, Eric Müller, Johannes Schemmel
Lecture Notes in Computer Science
Lecture Notes in Computer Science, Machine Learning, Optimization, and Data Science· 2025DOI
Robin Dietrich, Philipp Spilger, Eric Müller, Johannes Schemmel, Alois C. Knoll
Linking cellular-level phenomena to brain architecture: the case of spiking cerebellar controllers
Neural Networks· 2025DOI
Egidio D’Angelo, Alberto Antonietti, Alice Geminiani, Benedetta Gambosi, Cristiano Alessandro, Emiliano Buttarazzi, Alessandra Pedrocchi, Claudia Casellato
Lu.i – A low-cost electronic neuron for education and outreach
Trends in Neuroscience and Education· 2025DOI
Yannik Stradmann, Julian Göltz, Mihai A. Petrovici, Johannes Schemmel, Sebastian Billaudelle
Metadata practices for simulation workflows
Scientific Data· 2025DOI
José Villamar, Matthias Kelbling, Heather L. More, Michael Denker, Tom Tetzlaff, Johanna Senk, Stephan Thober
Modeling impairment of ionic regulation with extended Adaptive Exponential integrate-and-fire models
Journal of Computational Neuroscience· 2025DOI
Damien Depannemaecker, Federico Tesler, Mathieu Desroches, Viktor Jirsa, Alain Destexhe
Modeling nitric oxide diffusion and plasticity modulation in cerebellar learning
APL Bioengineering· 2025DOI
Alessandra Maria Trapani, Carlo Andrea Sartori, Benedetta Gambosi, Alessandra Pedrocchi, Alberto Antonietti
MRI R2* captures inflammation in disconnected brain structures after stroke: a translational study
Brain· 2025DOI
Ismail Koubiyr, Takayuki Yamamoto, Laurent Petit, Nadège Dubourdieu, Elena Avignone, Elise Cozensa, Chloé Galmiche, Hikaru Fukutomi, Igor Sibon, Vincent Dousset, Michel Thiebaut de Schotten, Aude Panatier, Marion Tible, Thomas Tourdias
Multi-timescale synaptic plasticity on analog neuromorphic hardware
2025 Neuro Inspired Computational Elements (NICE)· 2025DOI
Amani Atoui, Jakob Kaiser, Sebastian Billaudelle, Philipp Spilger, Eric Müller, Jannik Luboeinski, Christian Tetzlaff, Johannes Schemmel
Multimodal gradients unify local and global cortical organization
Nature Communications· 2025DOI
Yezhou Wang, Nicole Eichert, Casey Paquola, Raul Rodriguez-Cruces, Jordan DeKraker, Jessica Royer, Donna Gift Cabalo, Hans Auer, Alexander Ngo, Ilana R. Leppert, Christine L. Tardif, David A. Rudko, Robert Leech, Katrin Amunts, Sofie L. Valk, Jonathan Smallwood, Alan C. Evans, Boris C. Bernhardt
Nature Communications
Nature Communications· 2025DOI
Pedro Nascimento Alves; Victor Nozais; Justine Y. Hansen; Maurizio Corbetta; Parashkev Nachev; Isabel Pavão Martins; Michel Thiebaut de Schotten
Navigating Conflicting Interests: The Role of Gender Competent Management for Effective Gender Equality Plans
Social Inclusion· 2025DOI
Angela Wroblewski, Karin Grasenick
On the validity of electric brain signal predictions based on population firing rates
PLOS Computational Biology· 2025DOI
Torbjørn V. Ness, Tom Tetzlaff, Gaute T. Einevoll, David Dahmen
Prediction of Verbal Abilities From Brain Connectivity Data Across the Lifespan Using a Machine Learning Approach
Human Brain Mapping· 2025DOI
Deborah Früh, Camilla Mendl‐Heinisch, Nora Bittner, Susanne Weis, Svenja Caspers
Principles and Operation of Virtual Brain Twins
IEEE Reviews in Biomedical Engineering· 2025DOI
Meysam Hashemi, Damien Depannemaecker, Marisa Saggio, Paul Triebkorn, Giovanni Rabuffo, Jan Fousek, Abolfazl Ziaeemehr, Viktor Sip, Anastasios Athanasiadis, Martin Breyton, Marmaduke Woodman, Huifang Wang, Spase Petkoski, Pierpaolo Sorrentino, Viktor Jirsa
Region-specific mean field models enhance simulations of local and global brain dynamics
npj Systems Biology and Applications· 2025DOI
Roberta Maria Lorenzi, Fulvia Palesi, Claudia Casellato, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D’Angelo
Scalable network emulation on analog neuromorphic hardware
Frontiers in Neuroscience· 2025DOI
Elias Arnold, Philipp Spilger, Jan V. Straub, Eric Müller, Dominik Dold, Gabriele Meoni, Johannes Schemmel
Scientific Reports
Scientific Reports· 2025DOI
auf der Heiden, Franca; Axer, Markus; Amunts, Katrin; Menzel, Miriam
Short-reach Optical Communications: A Real-world Task for Neuromorphic Hardware
2025 Neuro Inspired Computational Elements (NICE)· 2025DOI
Elias Arnold, Eike-Manuel Edelmann, Alexander von Bank, Eric Müller, Laurent Schmalen, Johannes Schemmel
Simulating the impact of white matter connectivity on processing time scales using brain network models
Communications Biology· 2025DOI
Paul Triebkorn, Viktor Jirsa, Peter Ford Dominey
Synchronization in spiking neural networks with short and long connections and time delays
Chaos: An Interdisciplinary Journal of Nonlinear Science· 2025DOI
Lionel Kusch, Martin Breyton, Damien Depannemaecker, Spase Petkoski, Viktor K. Jirsa
The developing mouse dopaminergic system: Cortical-subcortical shift in D1/D2 receptor balance and increasing regional differentiation
Neurochemistry International· 2025DOI
Ingvild E. Bjerke, Harry Carey, Jan G. Bjaalie, Trygve B. Leergaard, Jee Hyun Kim
The predictive nature of spontaneous brain activity across scales and species
Neuron· 2025DOI
Anastasia Dimakou, Giovanni Pezzulo, Andrea Zangrossi, Maurizio Corbetta
The Virtual Parkinsonian patient
npj Systems Biology and Applications· 2025DOI
Marianna Angiolelli, Damien Depannemaecker, Hasnae Agouram, Jean Régis, Romain Carron, Marmaduke Woodman, Letizia Chiodo, Paul Triebkorn, Abolfazl Ziaeemehr, Meysam Hashemi, Alexandre Eusebio, Viktor Jirsa, Pierpaolo Sorrentino
3D reconstruction of BigBrain2: Progress report on semi-automated repairs of histological sections
doi:10.34734/FZJ-2024-05655· 2024DOI
Lepage, Claude; Mohlberg, Hartmut; Lewis, Lindsay B.; Toussaint, Paule-J.; Wenzel, Susanne; Evans, Alan C.; Amunts, Katrin
A layered microcircuit model of somatosensory cortex with three interneuron types and cell-type-specific short-term plasticity
Cerebral Cortex· 2024DOI
Han-Jia Jiang, Guanxiao Qi, Renato Duarte, Dirk Feldmeyer, Sacha J van Albada
A Model with Dopamine Depletion in Basal Ganglia and Cerebellum Predicts Changes in Thalamocortical Beta Oscillations
International Journal of Neural Systems· 2024DOI
Benedetta Gambosi, Francesco Jamal Sheiban, Marco Biasizzo, Alberto Antonietti, Egidio D’angelo, Alberto Mazzoni, Alessandra Pedrocchi
Analyzing Regional Organization of The Human Hippocampus in 3D-PLI Using Contrastive Learning and Geometric Unfolding
2024 IEEE International Symposium on Biomedical Imaging (ISBI)· 2024DOI
Alexander Oberstrass, Jordan DeKraker, Nicola Palomero-Gallagher, Sascha E. A. Muenzing, Alan C. Evans, Markus Axer, Katrin Amunts, Timo Dickscheid
Automatic Characterization of Fiber Architecture in 3D-PLI Using Contrastive Learning
Helmholtz AI Conference 2024, HAICON24, Düsseldorf, Germany, 2024-06-12 - 2024-06-14· 2024DOI
Oberstraß, Alexander; Schiffer, Christian; Axer, Markus; Amunts, Katrin; Dickscheid, Timo
Bifurcations and bursting in the Epileptor
PLOS Computational Biology· 2024DOI
Maria Luisa Saggio, Viktor Jirsa
Closing the loop: High-speed robotics with accelerated neuromorphic hardware
Frontiers in Neuroscience· 2024DOI
Yannik Stradmann, Johannes Schemmel
Comparison of basal ganglia regions across murine brain atlases using metadata models and the Waxholm Space
Scientific Data· 2024DOI
H. Kleven, U. Schlegel, H. J. Groenewegen, T. B. Leergaard, I. E. Bjerke
Compressed representation of brain genetic transcription
Human Brain Mapping· 2024DOI
James K. Ruffle; Henry Watkins; Robert J. Gray; Harpreet Hyare; Michel Thiebaut de Schotten; Parashkev Nachev
Contrastive Learning of Cytoarchitecture using Spatial Information
doi:10.34734/FZJ-2024-05541· 2024DOI
Boztoprak, Zeynep; Dickscheid, Timo; Amunts, Katrin; Schiffer, Christian
Cytoarchitectonic Analysis and 3D Maps of the Mesial Piriform Region in the Human Brain
Anatomia· 2024DOI
Olga Kedo, Sebastian Bludau, Christian Schiffer, Hartmut Mohlberg, Timo Dickscheid, Katrin Amunts
CytoNet: A Deep Neural Network for Whole-brain Characterization of Human Cytoarchitecture
doi:10.34734/FZJ-2024-05546· 2024DOI
Schiffer, Christian; Boztoprak, Zeynep; Amunts, Katrin; Dickscheid, Timo
Digital tools of analysis and data integration facilitate synergy between mouse and human brain research and enable translation
Mammalian Genome· 2024DOI
Sabine M. Hölter, Lillian Garrett, Sebastian Bludau, Katrin Amunts
Effects of the spatial resolution of the Virtual Epileptic Patient on the identification of epileptogenic networks
Imaging Neuroscience· 2024DOI
Jean-Didier Lemaréchal, Paul Triebkorn, Anirudh Nihalani Vattikonda, Meysam Hashemi, Marmaduke Woodman, Maxime Guye, Fabrice Bartolomei, Huifang E. Wang, Viktor Jirsa
Frontiers in Computational Neuroscience
Frontiers in Computational Neuroscience· 2024DOI
Astrid Correa; Adam Ponzi; Adam Ponzi; Vladimir M. Calderón; Rosanna Migliore
Frontiers in Neuroanatomy
Frontiers in Neuroanatomy· 2024DOI
Ivan Velasco; Juan J. Garcia-Cantero; Juan J. Garcia-Cantero; Juan P. Brito; Juan P. Brito; Sofia Bayona; Sofia Bayona; Luis Pastor; Luis Pastor; Susana Mata; Susana Mata
Generative Modelling of Cortical Receptor Distributions from Cytoarchitectonic Images in the Macaque Brain
Neuroinformatics· 2024DOI
Ahmed Nebli, Christian Schiffer, Meiqi Niu, Nicola Palomero-Gallagher, Katrin Amunts, Timo Dickscheid
Identifying sources of bias when testing three available algorithms for quantifying white matter lesions: BIANCA, LPA and LGA
GeroScience· 2024DOI
Tatiana Miller, Nora Bittner, Susanne Moebus, Svenja Caspers
Inference on the Macroscopic Dynamics of Spiking Neurons
Neural Computation· 2024DOI
Nina Baldy, Martin Breyton, Marmaduke M. Woodman, Viktor K. Jirsa, Meysam Hashemi
Interdisciplinary and Collaborative Training in Neuroscience: Insights from the Human Brain Project Education Programme
Neuroinformatics· 2024DOI
Alice Geminiani, Judith Kathrein, Alper Yegenoglu, Franziska Vogel, Marcelo Armendariz, Ziv Ben-Zion, Petrut Antoniu Bogdan, Joana Covelo, Marissa Diaz Pier, Karin Grasenick, Vitali Karasenko, Wouter Klijn, Tina Kokan, Carmen Alina Lupascu, Anna Lührs, Tara Mahfoud, Taylan Özden, Jens Egholm Pedersen, Luca Peres, Ingrid Reiten, Nikola Simidjievski, Inga Ulnicane, Michiel van der Vlag, Lyuba Zehl, Alois Saria, Sandra Diaz-Pier, Johannes Passecker
jaxsnn: Event-driven Gradient Estimation for Analog Neuromorphic Hardware
2024 Neuro Inspired Computational Elements Conference (NICE)· 2024DOI
Eric Müller, Moritz Althaus, Elias Arnold, Philipp Spilger, Christian Pehle, Johannes Schemmel
Kinetics and functional consequences of BK channels activation by N-type Ca2+ channels in the dendrite of mouse neocortical layer-5 pyramidal neurons
Frontiers in Cellular Neuroscience· 2024DOI
Laila Ananda Blömer, Elisabetta Giacalone, Fatima Abbas, Luiza Filipis, Domenico Tegolo, Michele Migliore, Marco Canepari
Mapping brain lesions to conduction delays: the next step for personalized brain models in Multiple Sclerosis
Human Brain Mapping· 2024DOI
C. Mazzara; A. Ziaeemehr; E. Lopez Troisi; L. Cipriano; M. Angiolelli; M. Sparaco; M. Quarantelli; C. Granata; G. Sorrentino; M. Hashemi; V. Jirsa; P. Sorrentino
Mathematical generation of data-driven hippocampal CA1 pyramidal neurons and interneurons copies via A-GLIF models for large-scale networks covering the experimental variability range
Mathematical Biosciences· 2024DOI
A. Marasco, C. Tribuzi, A. Iuorio, M. Migliore
Mesoscale simulations predict the role of synergistic cerebellar plasticity during classical eyeblink conditioning
PLOS Computational Biology· 2024DOI
Alice Geminiani, Claudia Casellato, Henk-Jan Boele, Alessandra Pedrocchi, Chris I. De Zeeuw, Egidio D’Angelo
MIP: Advanced Data Processing and Analytics for Science and Medicine
Advances in Database Technology - Volume 27 Proceedings 27th International Conference on Extending Database Technology ( EDBT 2024 ) Paestum, Italy, March 25 - March 28· 2024DOI
Kostas Filippopolitis, Yannis Foufoulas, Minos Garofalakis, Apostolos Glenis, Yannis Ioannidis, Thanasis-Michail Karampatsis, Maria-Olympia Katsouli, Evdokia Mailli, Asimakis Papageorgiou-Mariglis, Giorgos Papanikos, George Pikramenos, Jason Sakellariou,
Modeling realistic synaptic inputs of CA1 hippocampal pyramidal neurons and interneurons via Adaptive Generalized Leaky Integrate-and-Fire models
Mathematical Biosciences· 2024DOI
A. Marasco, C. Tribuzi, C.A. Lupascu, M. Migliore
Multi-scale spiking network model of human cerebral cortex
Cerebral Cortex· 2024DOI
Jari Pronold, Alexander van Meegen, Renan O Shimoura, Hannah Vollenbröker, Mario Senden, Claus C Hilgetag, Rembrandt Bakker, Sacha J van Albada
Nature Communications
Nature Communications· 2024DOI
Pacella, Valentina; Nozais, Victor; Talozzi, Lia; Abdallah, Majd; Wassermann, Demian; Forkel, Stephanie; Thiebaut de Schotten, Michel
Neurobiology of Disease
Neurobiology of Disease· 2024DOI
Lorenzo Pini; Giuseppe Lombardi; Giulio Sansone; Matteo Gaiola; Marta Padovan; Francesco Volpin; Luca Denaro; Maurizio Corbetta; Alessandro Salvalaggio
New organizational principles and 3D cytoarchitectonic maps of the dorsolateral prefrontal cortex in the human brain
Frontiers in Neuroimaging· 2024DOI
Ariane Bruno, Kimberley Lothmann, Sebastian Bludau, Hartmut Mohlberg, Katrin Amunts
Parameter estimation in a whole-brain network model of epilepsy: Comparison of parallel global optimization solvers
PLOS Computational Biology· 2024DOI
David R. Penas, Meysam Hashemi, Viktor K. Jirsa, Julio R. Banga
Reconciliation of weak pairwise spike–train correlations and highly coherent local field potentials across space
Cerebral Cortex· 2024DOI
Johanna Senk, Espen Hagen, Sacha J van Albada, Markus Diesmann
Scientific Reports
Scientific Reports· 2024DOI
Rocha R. P.; Zorzi M.; Corbetta M.
Self-supervised representation learning for nerve fiber distribution patterns in 3D-PLI
Imaging Neuroscience· 2024DOI
Alexander Oberstrass, Sascha E.A. Muenzing, Meiqi Niu, Nicola Palomero-Gallagher, Christian Schiffer, Markus Axer, Katrin Amunts, Timo Dickscheid
Semaphorin-3A regulates liver sinusoidal endothelial cell porosity and promotes hepatic steatosis
Nature Cardiovascular Research· 2024DOI
Daniel Eberhard, Sydney Balkenhol, Andrea Köster, Paula Follert, Eric Upschulte, Philipp Ostermann, Philip Kirschner, Celina Uhlemeyer, Iannis Charnay, Christina Preuss, Sandra Trenkamp, Bengt-Frederik Belgardt, Timo Dickscheid, Irene Esposito, Michael Roden, Eckhard Lammert
Simulation-based inference on virtual brain models of disorders
Machine Learning: Science and Technology· 2024DOI
Meysam Hashemi, Abolfazl Ziaeemehr, Marmaduke M Woodman, Jan Fousek, Spase Petkoski, Viktor K Jirsa
Spatially integrated cortico-subcortical tracing data for analyses of rodent brain topographical organization
Scientific Data· 2024DOI
Martin Øvsthus, Maaike M. H. van Swieten, Maja A. Puchades, Chiara Tocco, Michèle Studer, Jan G. Bjaalie, Trygve B. Leergaard
Symmetry breaking organizes the brain’s resting state manifold
Scientific Reports· 2024DOI
Jan Fousek, Giovanni Rabuffo, Kashyap Gudibanda, Hiba Sheheitli, Spase Petkoski, Viktor Jirsa
The coming decade of digital brain research: A vision for neuroscience at the intersection of technology and computing
Imaging Neuroscience· 2024DOI
Katrin Amunts, Markus Axer, Swati Banerjee, Lise Bitsch, Jan G. Bjaalie, Philipp Brauner, Andrea Brovelli, Navona Calarco, Marcel Carrere, Svenja Caspers, Christine J. Charvet, Sven Cichon, Roshan Cools, Irene Costantini, Egidio Ugo D’Angelo, Giulia De Bonis, Gustavo Deco, Javier DeFelipe, Alain Destexhe, Timo Dickscheid, Markus Diesmann, Emrah Düzel, Simon B. Eickhoff, Gaute Einevoll, Damian Eke, Andreas K. Engel, Alan C. Evans, Kathinka Evers, Nataliia Fedorchenko, Stephanie J. Forkel, Jan Fousek, Angela D. Friederici, Karl Friston, Stephen Furber, Liesbet Geris, Rainer Goebel, Onur Güntürkün, Aini Ismafairus Abd Hamid, Christina Herold, Claus C. Hilgetag, Sabine M. Hölter, Yannis Ioannidis, Viktor Jirsa, Sriranga Kashyap, Burkhard S. Kasper, Alban de Kerchove d’Exaerde, Roxana Kooijmans, István Koren, Jeanette Hellgren Kotaleski, Gregory Kiar, Wouter Klijn, Lars Klüver, Alois C. Knoll, Zeljka Krsnik, Julia Kämpfer, Matthew E Larkum, Marja-Leena Linne, Thomas Lippert, Jafri Malin Abdullah, Paola Di Maio, Neville Magielse, Pierre Maquet, Anna Letizia Allegra Mascaro, Daniele Marinazzo, Jorge Mejias, Andreas Meyer-Lindenberg, Michele Migliore, Judith Michael, Yannick Morel, Fabrice O. Morin, Lars Muckli, Guy Nagels, Lena Oden, Nicola Palomero-Gallagher, Fanis Panagiotaropoulos, Pier Stanislao Paolucci, Cyriel Pennartz, Liesbet M. Peeters, Spase Petkoski, Nicolai Petkov, Lucy S. Petro, Mihai A. Petrovici, Giovanni Pezzulo, Pieter Roelfsema, Laurence Ris, Petra Ritter, Kathleen Rockland, Stefan Rotter, Andreas Rowald, Sabine Ruland, Philippe Ryvlin, Arleen Salles, Maria V. Sanchez-Vives, Johannes Schemmel, Walter Senn, Alexandra A. de Sousa, Felix Ströckens, Bertrand Thirion, Kâmil Uludağ, Simo Vanni, Sacha Jennifer van Albada, Wim Vanduffel, Julien Vezoli, Lisa Vincenz-Donnelly, Florian Walter, Laszlo Zaborszky
The Domains of Monotonicity Processing
Journal of Semantics· 2024DOI
I-An Tan, Nir Segal, Yosef Grodzinsky
The impact of Parkinson’s disease on striatal network connectivity and cortico-striatal drive: an in-silico study
Network Neuroscience· 2024DOI
Ilaria Carannante; Martina Scolamiero; J. J. Johannes Hjorth; Alexander Kozlov; Bo Bekkouche; Lihao Guo; Arvind Kumar; Wojciech Chachólski; Jeanette Hellgren Kotaleski
The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases
Frontiers in Neuroinformatics· 2024DOI
Camilla H. Blixhavn, Ingrid Reiten, Heidi Kleven, Martin Øvsthus, Sharon C. Yates, Ulrike Schlegel, Maja A. Puchades, Oliver Schmid, Jan G. Bjaalie, Ingvild E. Bjerke, Trygve B. Leergaard
The virtual multiple sclerosis patient
iScience· 2024DOI
P. Sorrentino, A. Pathak, A. Ziaeemehr, E. Troisi Lopez, L. Cipriano, A. Romano, M. Sparaco, M. Quarantelli, A. Banerjee, G. Sorrentino, V. Jirsa, M. Hashemi
Time to bury the chisel: a continuous dorsal association tract system
Brain Structure and Function· 2024DOI
Hoven, Emiel van den; Reisert, Marco; Musso, Mariacristina; Glauche, Volkmar; Rijntjes, Michel; Weiller, Cornelius
Virtual Brain Twins in EBRAINS
doi:10.34734/FZJ-2024-05114· 2024DOI
Jirsa, viktor; Meysam, Hashemi; Wang, Huifang; Woodman, Marmaduke; Triebkorn, Paul; Dollomaja, Borana; Runfola, Claudio; Depannemaecker, Damien; Breyton, Martin; Sorrentino, Pierpaolo; Klijn, Wouter; Petkoski, Spase
Virtual brain twins: from basic neuroscience to clinical use
National Science Review· 2024DOI
Huifang E Wang, Paul Triebkorn, Martin Breyton, Borana Dollomaja, Jean-Didier Lemarechal, Spase Petkoski, Pierpaolo Sorrentino, Damien Depannemaecker, Meysam Hashemi, Viktor K Jirsa
White matter changes after Gamma Knife Capsulotomy in patients with intractable obsessive-compulsive disorder
Heliyon· 2024DOI
Giorgio Spatola, Paul Triebkorn, Raphaelle Richieri, Christelle Baunez, Jean Farisse, Axelle Cretol, Eric Guedj, Viktor Jirsa, Jean Regis
Deliverables (14)
Other Results (1)
Periodic Reporting for period 1 - EBRAINS 2.0 (EBRAINS 2.0: A Research Infrastructure to Advance Neuroscience and Brain Health)